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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs61998400 chr15:31048088 T/C CHRNA7 chr15:32215641-32465219:+ 0.3 6.93 1.39E-11 Box Plot
THCA rs61998420 chr15:31072990 T/G CHRNA7 chr15:32215641-32465219:+ 0.33 6.48 2.33E-10 Box Plot
THCA rs61998421 chr15:31073492 A/C CHRNA7 chr15:32215641-32465219:+ 0.36 6.95 1.21E-11 Box Plot
THCA rs61998422 chr15:31076222 A/C CHRNA7 chr15:32215641-32465219:+ 0.35 6.79 3.28E-11 Box Plot
THCA rs61998425 chr15:31083174 T/C CHRNA7 chr15:32215641-32465219:+ 0.35 6.9 1.66E-11 Box Plot
THCA rs61998553 chr14:39743030 G/A LOC647288 chr13:75811890-75814517:- 0.42 8.3 1.07E-15 Box Plot
THCA rs62000670 chr14:39780791 C/T LOC647288 chr13:75811890-75814517:- 0.61 13.18 4.64E-34 Box Plot
THCA rs62014599 chr15:30943789 T/C CHRNA7 chr15:32215641-32465219:+ 0.42 9.06 3.4E-18 Box Plot
THCA rs62014600 chr15:30948120 T/G CHRNA7 chr15:32215641-32465219:+ 0.42 9.03 4.2E-18 Box Plot
THCA rs62014601 chr15:30949425 G/T CHRNA7 chr15:32215641-32465219:+ 0.43 9.09 2.59E-18 Box Plot
THCA rs62014603 chr15:30951076 T/G CHRNA7 chr15:32215641-32465219:+ 0.43 9.09 2.61E-18 Box Plot
THCA rs62014604 chr15:30951191 C/T CHRNA7 chr15:32215641-32465219:+ 0.43 9.09 2.61E-18 Box Plot
THCA rs62014606 chr15:30952959 A/G CHRNA7 chr15:32215641-32465219:+ 0.43 9.09 2.61E-18 Box Plot
THCA rs62014607 chr15:30963685 T/C CHRNA7 chr15:32215641-32465219:+ 0.44 9.15 1.71E-18 Box Plot
THCA rs62071672 chr17:15595731 T/C ZNF286B chr17:18561742-18585575:- 0.41 8.45 3.42E-16 Box Plot